These tutorials are divided into two categories, by coding language.

Links to Mathematica Tutorials

Mathematica tutorials: these tutorials are designed to rapidly familiarize students with Mathematica, dynamical systems theory, and the building of ordinary differential equation models of cytoplasmic processes and gene networks (Kerry Kim, Garry Odell)

Links to Java Tutorials

Java tutorials: these tutorials developed from research code, or as teaching tools during our research apprenticeships; they aim to instruct the user in a use of research code/methods, or in Java programming as relevant to biological modeling.