affectors
Class XferOutAff

java.lang.Object
  affectors.Affector
      affectors.XferOutAff

All Implemented Interfaces:

java.lang.Cloneable

public class XferOutAff

extends Affector

This is one half of a pair of Affectors that moves things from one cell to neighboring cells. That is, this is a rough means to have diffusive transport directly from cytoplasm to cytoplasm (e.g. in a syncytium where the "cells" represent unit volumes of cytoplasm rather than real cells. The transfer rate should be the same in both the XferOutAff and XferInAff. Note that all interfaces between adjacent cells are assumed to have the same area and permeability.

Formula
dNODEX/dt = Number of cell faces * Xfer_NODEX * NODEX

Parameters

Target [NODEX]	The Node undergoing difusion.
Transfer rate [Mxfer_NODEX]	The rate at which the Node transfers across the each boundary.

Usage
&NODEX

&XferOutAff NODEX Xfer_NODEX &XferInAff NODEX Xfer_NODEX

&endNODEX/code>

Field Summary

Fields inherited from class affectors.Affector

ADesc, affectorType, CC, CERTIFICATION, CONVERSION, copyNumber, DEGRADATION, FF, firstFreeParam, GG, GUI_CAPABLE, HH, KK, MATHTYPE, NDesc, PDesc, PRODUCTION, RETURNS_DERIV, RETURNS_PARTIALS, TERMTYPE, TT, Type, UNSPECIFIED

Constructor Summary

XferOutAff()

Method Summary

float	getNCValue(Node which_node)
float	getValue(Node which_node)
protected void	setLabelsAndTypes()
void	setParameterNumbers(int[] param_nums)

Methods inherited from class affectors.Affector

addDefaultParam, Chi, clearStatic, copy_, copy, doesContainTarget, findOrCreateParam, findParam, fixNodes, getNodes, getNumNodes, getNumParameters, getOtherSide, getParameter, getParameter, getParamName, getParamPos, getParamValue, getParamValue, getParamVariationMode, init, isLinearInTarget, Phi, Psi, setContainsTarget, setDescriptions, setParameter, setParamRange, setParamRange, setParamValue, setParamValue, setSide, setSided

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

XferOutAff

public XferOutAff()

Method Detail

setLabelsAndTypes

protected void setLabelsAndTypes()

Specified by:

setLabelsAndTypes in class Affector

setParameterNumbers

public void setParameterNumbers(int[] param_nums)

Specified by:

setParameterNumbers in class Affector

getValue

public float getValue(Node which_node)

Overrides:

getValue in class Affector

getNCValue

public float getNCValue(Node which_node)

Overrides:

getNCValue in class Affector