affectors
Class CleaveB_Aff

java.lang.Object
  affectors.Affector
      affectors.CleaveB_Aff

All Implemented Interfaces:

java.lang.Cloneable

public class CleaveB_Aff

extends Affector

This is one half of an affector that cleaves a single cytoplasmic node into two other cytoplasmic nodes. The rate of cleavage is not regulated by any other species and follow simple enzymne kinetics. Use CleaveA_Aff on the dimer. Use this version in each of the product species.

Formula
dMonomer/dt = k_cleaveage * DIMER

Parameters

Dimer [DIMER]	The dimer being cleaved
Kappa [k_cleaveage]	The rate for cleveage

Usage
&MONOMER

&CleaveB_AFF DIMER k_cleveage

&endMONOMER

See Also:

CleaveA_Aff

Field Summary

Fields inherited from class affectors.Affector

ADesc, affectorType, CC, CERTIFICATION, CONVERSION, copyNumber, DEGRADATION, FF, firstFreeParam, GG, GUI_CAPABLE, HH, KK, MATHTYPE, NDesc, PDesc, PRODUCTION, RETURNS_DERIV, RETURNS_PARTIALS, TERMTYPE, TT, Type, UNSPECIFIED

Constructor Summary

CleaveB_Aff()

Method Summary

float	getValue(Node which_node)
protected void	setLabelsAndTypes()
void	setParameterNumbers(int[] param_nums)

Methods inherited from class affectors.Affector

addDefaultParam, Chi, clearStatic, copy_, copy, doesContainTarget, findOrCreateParam, findParam, fixNodes, getNCValue, getNodes, getNumNodes, getNumParameters, getOtherSide, getParameter, getParameter, getParamName, getParamPos, getParamValue, getParamValue, getParamVariationMode, init, isLinearInTarget, Phi, Psi, setContainsTarget, setDescriptions, setParameter, setParamRange, setParamRange, setParamValue, setParamValue, setSide, setSided

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CleaveB_Aff

public CleaveB_Aff()

Method Detail

setLabelsAndTypes

protected void setLabelsAndTypes()

Specified by:

setLabelsAndTypes in class Affector

setParameterNumbers

public void setParameterNumbers(int[] param_nums)

Specified by:

setParameterNumbers in class Affector

getValue

public float getValue(Node which_node)

Overrides:

getValue in class Affector