stat
Class Stat

java.lang.Object
  stat.Stat

All Implemented Interfaces:

java.lang.Runnable

Direct Known Subclasses:

CenterCenterDistanceStat, CrossCorrStat, DumpStat, DumpSuccessArrayStat, DumpValueFieldsStat, FilterParamsStat, ParamTendenciesStat, SummaryStat, ValueFieldHistogramStat

public class Stat

extends java.lang.Object

implements java.lang.Runnable

Stat is the base class for statistical output classes from GeneNet. Override this class to implement a particular statistic. The only function you really need to override is the run method. paramSets will be set to the currently loaded Cam file. Each stat should check to make sure this is not null before starting to do anything. Calling paramSets.goToBeginning() will get the first ParameterSet in that cam (which meets all the criteria currently set for the cam). After that, use calls to paramSets.getNextSet() to get subsequent sets. When either of these return null, you're done.
Note - To add a new stat into the program, all you need to do is add its name, minus the Stat at the end, into the Statistics menu set up in the CamGraph object. Note - because of how CamGraph figures out statistic names, all statistics objects must end in Stat, as in DumpStat or AveragesStat.

Constructor Summary

Stat()

Method Summary

void	calculateStat()
void	init(ParameterSetArray psa)
void	run()
void	setOutputFile(java.lang.String filename)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Stat

public Stat()

Method Detail

init

public void init(ParameterSetArray psa)

run

public void run()

Specified by:

run in interface java.lang.Runnable

calculateStat

public void calculateStat()

setOutputFile

public void setOutputFile(java.lang.String filename)
                   throws java.io.IOException

Throws:

java.io.IOException