iterators
Class PopEvolveExpanderIterator

java.lang.Object
  iterators.ModelIterator
      iterators.PopEvolveExpanderIterator

All Implemented Interfaces:

java.lang.Runnable

public class PopEvolveExpanderIterator

extends ModelIterator

Field Summary

Fields inherited from class iterators.ModelIterator

cells, finalScore, model, network, nParsTV, numCells, numFunctionCalls, origStopper, outFileName, p, parsTV, ps, running, runThread, theFunction, TheIteratorViewer, verbose

Constructor Summary

PopEvolveExpanderIterator()

Method Summary

void	doRun()
float	getHybridityScore(ParameterSet p1, ParameterSet p2)
boolean	isSaveExtra() Override to return true so we can save all the extra parameter sets we come up with.
protected void	loadParameter(java.lang.String info, BetterTokenizer tokenizer) Loads parameters specific to this iterator.
void	reset() Called before each run of an iterator.

Methods inherited from class iterators.ModelIterator

continueF, copy, didBomb, didPass, doStartRun, F, getOutputFileName, getParameterSet, getState, getStopper, getValue, init, isRunning, iterError, loadParameters, print, println, println, quit, resetStopper, run, saveExtra, saveOutput, saveOutputTags, setFunction, setIteratorViewer, setOutputFile, setPrint, setPrintStream, setState, setStopper, startRun, stopRun

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PopEvolveExpanderIterator

public PopEvolveExpanderIterator()

Method Detail

loadParameter

protected void loadParameter(java.lang.String info,
                             BetterTokenizer tokenizer)
                      throws java.lang.Exception

Loads parameters specific to this iterator.

Overrides:

loadParameter in class ModelIterator

Throws:

java.lang.Exception

reset

public void reset()

Description copied from class: ModelIterator

Called before each run of an iterator. This reset contains code that all iterators should do when they are reset. Subclasses should override to perform any additional operations they need to do when reset, but they should also call super.reset().

Overrides:

reset in class ModelIterator

doRun

public void doRun()

Overrides:

doRun in class ModelIterator

getHybridityScore

public float getHybridityScore(ParameterSet p1,
                               ParameterSet p2)

isSaveExtra

public boolean isSaveExtra()

Override to return true so we can save all the extra parameter sets we come up with.

Overrides:

isSaveExtra in class ModelIterator