affectors
Class VonForresterB_ECAff

java.lang.Object
  affectors.Affector
      affectors.VonForresterB_ECAff

All Implemented Interfaces:

java.lang.Cloneable

public class VonForresterB_ECAff

extends Affector

This affector implements one half of a constant delay through a von Forrester equation. This affector represents the flux OUT OF the delayed node from the previously delayed node and is for use on membrane nodes only. Use VonForresterA_ECAff for the flux into the delayed node. Use the EC version for cytoplasmic nodes.

Effectively, this is a bucket brigade, or conveyor belt, where the delay is implemented as a series of nodes, each a delayed version of the previous. Using too few delay nodes will result in lowpass filtering. In general, you should look at the highest frequency/most rapid change you care about, and use as many delay nodes as necessary to preserve the features you want.

The parameter v is the velocity or rate that one delay node transfers into the next. It should be equal to the number of delay nodes divided by the maximal delay.

Formula
dNodeDelay_N/dt = -vNodeDelay_N

Parameters

Delayed node [NodeDelayN]	The delayed node
Velocity [v]	The rate of transfer into & out of this node. Should be equal to the number of delay nodes/time of delay

Usage
&nodeDelayN

&VonForresterB_ICAff nodeDelayN v

&endnodeDelayN

See Also:

VonForresterA_ECAff, VonForresterA_ICAff, VonForresterB_ICAff

Field Summary

Fields inherited from class affectors.Affector

ADesc, affectorType, CC, CERTIFICATION, CONVERSION, copyNumber, DEGRADATION, FF, firstFreeParam, GG, GUI_CAPABLE, HH, KK, MATHTYPE, NDesc, PDesc, PRODUCTION, RETURNS_DERIV, RETURNS_PARTIALS, TERMTYPE, TT, Type, UNSPECIFIED

Constructor Summary

VonForresterB_ECAff()

Method Summary

float	getNCValue(Node which_node)
float	getValue(Node which_node)
protected void	setLabelsAndTypes()
void	setParameterNumbers(int[] param_nums)

Methods inherited from class affectors.Affector

addDefaultParam, Chi, clearStatic, copy_, copy, doesContainTarget, findOrCreateParam, findParam, fixNodes, getNodes, getNumNodes, getNumParameters, getOtherSide, getParameter, getParameter, getParamName, getParamPos, getParamValue, getParamValue, getParamVariationMode, init, isLinearInTarget, Phi, Psi, setContainsTarget, setDescriptions, setParameter, setParamRange, setParamRange, setParamValue, setParamValue, setSide, setSided

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

VonForresterB_ECAff

public VonForresterB_ECAff()

Method Detail

setLabelsAndTypes

protected void setLabelsAndTypes()

Specified by:

setLabelsAndTypes in class Affector

setParameterNumbers

public void setParameterNumbers(int[] param_nums)

Specified by:

setParameterNumbers in class Affector

getValue

public float getValue(Node which_node)

Overrides:

getValue in class Affector

getNCValue

public float getNCValue(Node which_node)

Overrides:

getNCValue in class Affector